Similarity cyclic DNA codes over rings

Irfan Siap, Taher Abualrub, Ali Ghrayeb

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Citations (Scopus)

Abstract

In this paper we construct a special type of cyclic codes called cyclic DNA codes over the ring R = {0, 1, u, u + 1} where u2 = 1. These codes are important in the subject of biomolecular computation and DNA computing.We apply a more suitable measure (the similarity measure) than the Hamming distance measure on the set of codewords. Our similarity measure depends on the number of hydrogen bonds between Watson Crick complement pairs.

Original languageEnglish
Title of host publication2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008
PublisherIEEE Computer Society
Pages612-615
Number of pages4
ISBN (Print)9781424417483
DOIs
Publication statusPublished - 2008
Externally publishedYes
Event2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008 - Shanghai, China
Duration: 16 May 200818 May 2008

Other

Other2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008
CountryChina
CityShanghai
Period16/5/0818/5/08

Fingerprint

Molecular Computers
Hydrogen
DNA
Hamming distance
Hydrogen bonds

ASJC Scopus subject areas

  • Biotechnology
  • Biomedical Engineering

Cite this

Siap, I., Abualrub, T., & Ghrayeb, A. (2008). Similarity cyclic DNA codes over rings. In 2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008 (pp. 612-615). [4535029] IEEE Computer Society. https://doi.org/10.1109/ICBBE.2008.149

Similarity cyclic DNA codes over rings. / Siap, Irfan; Abualrub, Taher; Ghrayeb, Ali.

2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008. IEEE Computer Society, 2008. p. 612-615 4535029.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Siap, I, Abualrub, T & Ghrayeb, A 2008, Similarity cyclic DNA codes over rings. in 2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008., 4535029, IEEE Computer Society, pp. 612-615, 2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008, Shanghai, China, 16/5/08. https://doi.org/10.1109/ICBBE.2008.149
Siap I, Abualrub T, Ghrayeb A. Similarity cyclic DNA codes over rings. In 2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008. IEEE Computer Society. 2008. p. 612-615. 4535029 https://doi.org/10.1109/ICBBE.2008.149
Siap, Irfan ; Abualrub, Taher ; Ghrayeb, Ali. / Similarity cyclic DNA codes over rings. 2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008. IEEE Computer Society, 2008. pp. 612-615
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