Next generation sequencing in nonsyndromic intellectual disability

From a negative molecular karyotype to a possible causative mutation detection

Emmanouil Athanasakis, Danilo Licastro, Flavio Faletra, Antonella Fabretto, Savina Dipresa, Diego Vozzi, Anna Morgan, Adamo P. D'Adamo, Vanna Pecile, Xevi Biarnés, Paolo Gasparini

Research output: Contribution to journalArticle

22 Citations (Scopus)

Abstract

The identification of causes underlying intellectual disability (ID) is one of the most demanding challenges for clinical Geneticists and Researchers. Despite molecular diagnostics improvements, the vast majority of patients still remain without genetic diagnosis. Here, we report the results obtained using Whole Exome and Target Sequencing on nine patients affected by isolated ID without pathological copy number variations, which were accurately selected from an initial cohort of 236 patients. Three patterns of inheritance were used to search for: (1) de novo, (2) X-linked, and (3) autosomal recessive variants. In three of the nine proband-parent trios analyzed, we identified and validated two de novo and one X-linked potentially causative mutations located in three ID-related genes. We proposed three genes as ID candidate, carrying one de novo and three X-linked mutations. Overall, this systematic proband-parent trio approach using next generation sequencing could explain a consistent percentage of patients with isolated ID, thus increasing our knowledge on the molecular bases of this disease and opening new perspectives for a better diagnosis, counseling, and treatment.

Original languageEnglish
Pages (from-to)170-176
Number of pages7
JournalAmerican Journal of Medical Genetics, Part A
Volume164
Issue number1
DOIs
Publication statusPublished - Jan 2014
Externally publishedYes

Fingerprint

Karyotype
Intellectual Disability
Mutation
Exome
Inheritance Patterns
Molecular Pathology
Genes
Counseling
Research Personnel
Therapeutics

Keywords

  • De novo
  • Exome sequencing
  • Intellectual disability
  • KDM5B
  • Nonsyndromic
  • Plexins
  • Target sequencing
  • X-linked

ASJC Scopus subject areas

  • Genetics(clinical)
  • Genetics
  • Medicine(all)

Cite this

Next generation sequencing in nonsyndromic intellectual disability : From a negative molecular karyotype to a possible causative mutation detection. / Athanasakis, Emmanouil; Licastro, Danilo; Faletra, Flavio; Fabretto, Antonella; Dipresa, Savina; Vozzi, Diego; Morgan, Anna; D'Adamo, Adamo P.; Pecile, Vanna; Biarnés, Xevi; Gasparini, Paolo.

In: American Journal of Medical Genetics, Part A, Vol. 164, No. 1, 01.2014, p. 170-176.

Research output: Contribution to journalArticle

Athanasakis, E, Licastro, D, Faletra, F, Fabretto, A, Dipresa, S, Vozzi, D, Morgan, A, D'Adamo, AP, Pecile, V, Biarnés, X & Gasparini, P 2014, 'Next generation sequencing in nonsyndromic intellectual disability: From a negative molecular karyotype to a possible causative mutation detection', American Journal of Medical Genetics, Part A, vol. 164, no. 1, pp. 170-176. https://doi.org/10.1002/ajmg.a.36274
Athanasakis, Emmanouil ; Licastro, Danilo ; Faletra, Flavio ; Fabretto, Antonella ; Dipresa, Savina ; Vozzi, Diego ; Morgan, Anna ; D'Adamo, Adamo P. ; Pecile, Vanna ; Biarnés, Xevi ; Gasparini, Paolo. / Next generation sequencing in nonsyndromic intellectual disability : From a negative molecular karyotype to a possible causative mutation detection. In: American Journal of Medical Genetics, Part A. 2014 ; Vol. 164, No. 1. pp. 170-176.
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