GeneGrid: From "virtual" bioinformatics laboratory to "Smart" bioinformatics laboratory

Sachin Wasnik; Paul Donachy; Terence Harmer; Ron Perrott; Puthen V. Jithesh; Mark McCurley; Jim Johnston; Michael Townsley; Shane Mckee

doi:10.1109/CBMS.2006.90

GeneGrid: From "virtual" bioinformatics laboratory to "Smart" bioinformatics laboratory

Sachin Wasnik, Paul Donachy, Terence Harmer, Ron Perrott, Puthen V. Jithesh, Mark McCurley, Jim Johnston, Michael Townsley, Shane Mckee

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

1 Citation (Scopus)

Abstract

One of the challenges for the grid community is to develop services to support both shared computation and shared information. As a part of this development, it is necessary to convert laboratories to pervasive computing environments (smart laboratories) where data generated in the laboratories can be captured and published automatically; where information generated can be combined and compound with other laboratories' data on demand, In this paper, we describe one such initiative to capture and consume the data generated by the nucleotide sequencer in the grid enabled automated analysis system called GeneGrid developed at the Belfast e-Science Centre.

Original language	English
Title of host publication	Proceedings - 19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006
Pages	768-773
Number of pages	6
Volume	2006
DOIs	https://doi.org/10.1109/CBMS.2006.90
Publication status	Published - 2006
Externally published	Yes
Event	19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006 - Salt Lake City, UT, United States Duration: 22 Jun 2006 → 23 Jun 2006

Other

Other	19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006
Country	United States
City	Salt Lake City, UT
Period	22/6/06 → 23/6/06

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ASJC Scopus subject areas

Radiology Nuclear Medicine and imaging
Computer Science Applications

Cite this

Wasnik, S., Donachy, P., Harmer, T., Perrott, R., Jithesh, P. V., McCurley, M., Johnston, J., Townsley, M., & Mckee, S. (2006). GeneGrid: From "virtual" bioinformatics laboratory to "Smart" bioinformatics laboratory. In Proceedings - 19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006 (Vol. 2006, pp. 768-773). [1647664] https://doi.org/10.1109/CBMS.2006.90

GeneGrid : From "virtual" bioinformatics laboratory to "Smart" bioinformatics laboratory. / Wasnik, Sachin; Donachy, Paul; Harmer, Terence; Perrott, Ron; Jithesh, Puthen V.; McCurley, Mark; Johnston, Jim; Townsley, Michael; Mckee, Shane.

Proceedings - 19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006. Vol. 2006 2006. p. 768-773 1647664.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Wasnik, S, Donachy, P, Harmer, T, Perrott, R, Jithesh, PV, McCurley, M, Johnston, J, Townsley, M & Mckee, S 2006, GeneGrid: From "virtual" bioinformatics laboratory to "Smart" bioinformatics laboratory. in Proceedings - 19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006. vol. 2006, 1647664, pp. 768-773, 19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006, Salt Lake City, UT, United States, 22/6/06. https://doi.org/10.1109/CBMS.2006.90

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Access to Document

10.1109/CBMS.2006.90