GeneGrid: From "virtual" bioinformatics laboratory to "Smart" bioinformatics laboratory

Sachin Wasnik, Paul Donachy, Terence Harmer, Ron Perrott, Puthen V. Jithesh, Mark McCurley, Jim Johnston, Michael Townsley, Shane Mckee

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

Abstract

One of the challenges for the grid community is to develop services to support both shared computation and shared information. As a part of this development, it is necessary to convert laboratories to pervasive computing environments (smart laboratories) where data generated in the laboratories can be captured and published automatically; where information generated can be combined and compound with other laboratories' data on demand, In this paper, we describe one such initiative to capture and consume the data generated by the nucleotide sequencer in the grid enabled automated analysis system called GeneGrid developed at the Belfast e-Science Centre.

Original languageEnglish
Title of host publicationProceedings - 19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006
Pages768-773
Number of pages6
Volume2006
DOIs
Publication statusPublished - 2006
Externally publishedYes
Event19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006 - Salt Lake City, UT, United States
Duration: 22 Jun 200623 Jun 2006

Other

Other19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006
CountryUnited States
CitySalt Lake City, UT
Period22/6/0623/6/06

Fingerprint

Bioinformatics
Computational Biology
Ubiquitous computing
Nucleotides

ASJC Scopus subject areas

  • Radiology Nuclear Medicine and imaging
  • Computer Science Applications

Cite this

Wasnik, S., Donachy, P., Harmer, T., Perrott, R., Jithesh, P. V., McCurley, M., ... Mckee, S. (2006). GeneGrid: From "virtual" bioinformatics laboratory to "Smart" bioinformatics laboratory. In Proceedings - 19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006 (Vol. 2006, pp. 768-773). [1647664] https://doi.org/10.1109/CBMS.2006.90

GeneGrid : From "virtual" bioinformatics laboratory to "Smart" bioinformatics laboratory. / Wasnik, Sachin; Donachy, Paul; Harmer, Terence; Perrott, Ron; Jithesh, Puthen V.; McCurley, Mark; Johnston, Jim; Townsley, Michael; Mckee, Shane.

Proceedings - 19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006. Vol. 2006 2006. p. 768-773 1647664.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Wasnik, S, Donachy, P, Harmer, T, Perrott, R, Jithesh, PV, McCurley, M, Johnston, J, Townsley, M & Mckee, S 2006, GeneGrid: From "virtual" bioinformatics laboratory to "Smart" bioinformatics laboratory. in Proceedings - 19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006. vol. 2006, 1647664, pp. 768-773, 19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006, Salt Lake City, UT, United States, 22/6/06. https://doi.org/10.1109/CBMS.2006.90
Wasnik S, Donachy P, Harmer T, Perrott R, Jithesh PV, McCurley M et al. GeneGrid: From "virtual" bioinformatics laboratory to "Smart" bioinformatics laboratory. In Proceedings - 19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006. Vol. 2006. 2006. p. 768-773. 1647664 https://doi.org/10.1109/CBMS.2006.90
Wasnik, Sachin ; Donachy, Paul ; Harmer, Terence ; Perrott, Ron ; Jithesh, Puthen V. ; McCurley, Mark ; Johnston, Jim ; Townsley, Michael ; Mckee, Shane. / GeneGrid : From "virtual" bioinformatics laboratory to "Smart" bioinformatics laboratory. Proceedings - 19th IEEE International Symposium on Computer-Based Medical Systems, CBMS 2006. Vol. 2006 2006. pp. 768-773
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