GeneGrid: A commercial grid service oriented Virtual Bioinformatics Laboratory

Noel Kelly, Puthen V. Jithesh, Paul Donachy, Terence J. Harmer, Ron H. Perrott, Mark McCurley, Michael Townsley, Jim Johnston, Shane McKee

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

Abstract

GeneGrid is a collaborative industrial grid computing R&D project initiated by the Belfast e-Science Centre (BeSC) under the UK e-Science programme and supported by the UK Department of Trade & Industry (DTI). GeneGrid includes commercial partners who provide real business engagement. The project aims to provide a platform for scientists to access their collective resources, skills, experiences and results in a secure, reliable and scalable manner through the creation of a "Virtual Bioinformatics Laboratory". GeneGrid provides seamless integration of a myriad of heterogeneous applications and datasets that span multiple administrative domains and locations across the globe, and presents these to the scientist through a simple user friendly interface. This paper will present each of the five main GeneGrid components, and discuss how these components are integrated to form an advanced Service Oriented Architecture for automatic and dynamic in silico experiment execution. A commercial use case as provided by our industrial partners will also be discussed.

Original languageEnglish
Title of host publicationProceedings - 2005 IEEE International Conference onServices Computing, SCC 2005
Pages43-50
Number of pages8
VolumeI
DOIs
Publication statusPublished - 2005
Externally publishedYes
Event2005 IEEE International Conference on Services Computing, SCC 2005 - Orlando, FL, United States
Duration: 11 Jul 200515 Jul 2005

Other

Other2005 IEEE International Conference on Services Computing, SCC 2005
CountryUnited States
CityOrlando, FL
Period11/7/0515/7/05

Fingerprint

Bioinformatics
Grid computing
Service oriented architecture (SOA)
User interfaces
Industry
Experiments

ASJC Scopus subject areas

  • Engineering(all)

Cite this

Kelly, N., Jithesh, P. V., Donachy, P., Harmer, T. J., Perrott, R. H., McCurley, M., ... McKee, S. (2005). GeneGrid: A commercial grid service oriented Virtual Bioinformatics Laboratory. In Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005 (Vol. I, pp. 43-50). [1531237] https://doi.org/10.1109/SCC.2005.55

GeneGrid : A commercial grid service oriented Virtual Bioinformatics Laboratory. / Kelly, Noel; Jithesh, Puthen V.; Donachy, Paul; Harmer, Terence J.; Perrott, Ron H.; McCurley, Mark; Townsley, Michael; Johnston, Jim; McKee, Shane.

Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005. Vol. I 2005. p. 43-50 1531237.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Kelly, N, Jithesh, PV, Donachy, P, Harmer, TJ, Perrott, RH, McCurley, M, Townsley, M, Johnston, J & McKee, S 2005, GeneGrid: A commercial grid service oriented Virtual Bioinformatics Laboratory. in Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005. vol. I, 1531237, pp. 43-50, 2005 IEEE International Conference on Services Computing, SCC 2005, Orlando, FL, United States, 11/7/05. https://doi.org/10.1109/SCC.2005.55
Kelly N, Jithesh PV, Donachy P, Harmer TJ, Perrott RH, McCurley M et al. GeneGrid: A commercial grid service oriented Virtual Bioinformatics Laboratory. In Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005. Vol. I. 2005. p. 43-50. 1531237 https://doi.org/10.1109/SCC.2005.55
Kelly, Noel ; Jithesh, Puthen V. ; Donachy, Paul ; Harmer, Terence J. ; Perrott, Ron H. ; McCurley, Mark ; Townsley, Michael ; Johnston, Jim ; McKee, Shane. / GeneGrid : A commercial grid service oriented Virtual Bioinformatics Laboratory. Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005. Vol. I 2005. pp. 43-50
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