Detection of unrecognized low-level mtDNA heteroplasmy may explain the variable phenotypic expressivity of apparently homoplastic mtDNA mutations

Ester Ballana, Nancy Govea, Rafael De Cid, Cecilia Garcia, Carles Arribas, Jordi Rosell, Xavier P. Estivill

Research output: Contribution to journalArticle

36 Citations (Scopus)

Abstract

Mitochondrial DNA (mtDNA) mutations are an important cause of human disease. Most mtDNA mutations are found in heteroplasmy, in which the proportion of mutant vs. wild-type species is believed to explain some of the observed high phenotypic heterogeneity. However, homoplasmic mutations also observe phenotypic heterogeneity, which may be in part due to undetected low levels of heteroplasmy. In the present report, we have developed two assays, using DHPLC and Pyrosequencing (Biotage AB, Uppsala, Sweden), for reliably and accurately detecting low-level mtDNA heteroplasmy. Using these assays we have identified a three-generation family segregating two mtDNA mutations in heteroplasmy: the deafness-related m.1555A>G mutation in the 12S rRNA gene (MTRNR1) and a new variant (m.15287T>C) in the cytochrome b gene (MTCYB). Both heteroplasmic mtDNA mutations are transmitted through generations in a random manner, thus showing differences in mutation load between siblings within the family. In addition, the developed assays were also used to screen a group of deaf subjects of unknown etiology for the presence of heteroplasmy for both mtDNA variants. Two additional heteroplasmic m.1555A>G samples, previously considered as homoplasmic, and two deaf subjects carrying m.15287T>C variant were identified, thus confirming the high specificity and reliability of the approach. The development of assays for reliably detecting low-level heteroplasmy, together with the study of heteroplasmic mtDNA transmission, are essential steps for a better knowledge and clinical management of mtDNA diseases.

Original languageEnglish
Pages (from-to)248-257
Number of pages10
JournalHuman Mutation
Volume29
Issue number2
DOIs
Publication statusPublished - Feb 2008
Externally publishedYes

Fingerprint

Mitochondrial DNA
Mutation
Knowledge Management
Mitochondrial Diseases
Cytochromes b
Deafness
rRNA Genes
Sweden
Genes

Keywords

  • 12S rRNA
  • Deafness
  • Heteroplasmy
  • Mitochondria
  • MTCYB
  • MTRNR1

ASJC Scopus subject areas

  • Genetics
  • Genetics(clinical)

Cite this

Detection of unrecognized low-level mtDNA heteroplasmy may explain the variable phenotypic expressivity of apparently homoplastic mtDNA mutations. / Ballana, Ester; Govea, Nancy; De Cid, Rafael; Garcia, Cecilia; Arribas, Carles; Rosell, Jordi; Estivill, Xavier P.

In: Human Mutation, Vol. 29, No. 2, 02.2008, p. 248-257.

Research output: Contribution to journalArticle

Ballana, Ester ; Govea, Nancy ; De Cid, Rafael ; Garcia, Cecilia ; Arribas, Carles ; Rosell, Jordi ; Estivill, Xavier P. / Detection of unrecognized low-level mtDNA heteroplasmy may explain the variable phenotypic expressivity of apparently homoplastic mtDNA mutations. In: Human Mutation. 2008 ; Vol. 29, No. 2. pp. 248-257.
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