Characterization of the coding sequence of the normal M4 ∝1-antitrypsin gene

Hiroshi Okayama, Mark D. Holmes, Mark L. Brantly, Ronald Crystal

Research output: Contribution to journalArticle

11 Citations (Scopus)

Abstract

The nucleotide sequences of the common normal "M" family of ∝1-antitrypsin (∝1AT) variants are known, including M1(Val213), M1(Ala213), M2 and M3. Less common, but also migrating with the "M" family on isoelectric focusing gels, is the normal M4 allele. Being relatively rare, the M4 allele is usually found in heterozygous combination with another ∝1AT allele making sequence characterization more difficult. To facilitate analysis of the coding exons of the ∝1AT M4 allele, a method was developed to combine blood monocyte RNA extraction, reverse transcription of the ∝1AT mRNA, amplification with the polymerase chain reaction and direct sequencing. This analysis demonstrated that the M4 allele differs from the M1(Val213) allele by a single nucleotide substitution G→A, causing the amino acid substitution Arg101 CGT→His101 CAT. This same mutation is also a part of the M2 gene suggesting that this region of the ∝1AT gene may be one of increased mutational activity.

Original languageEnglish
Pages (from-to)1560-1570
Number of pages11
JournalBiochemical and Biophysical Research Communications
Volume162
Issue number3
DOIs
Publication statusPublished - 15 Aug 1989
Externally publishedYes

Fingerprint

Substitution reactions
Nucleotides
Genes
Alleles
Polymerase chain reaction
Transcription
Amplification
Exons
Blood
Gels
RNA
Amino Acids
Messenger RNA
Isoelectric Focusing
Amino Acid Substitution
Reverse Transcription
Monocytes
Polymerase Chain Reaction
Mutation

ASJC Scopus subject areas

  • Biophysics
  • Biochemistry
  • Molecular Biology
  • Cell Biology

Cite this

Characterization of the coding sequence of the normal M4 ∝1-antitrypsin gene. / Okayama, Hiroshi; Holmes, Mark D.; Brantly, Mark L.; Crystal, Ronald.

In: Biochemical and Biophysical Research Communications, Vol. 162, No. 3, 15.08.1989, p. 1560-1570.

Research output: Contribution to journalArticle

Okayama, Hiroshi ; Holmes, Mark D. ; Brantly, Mark L. ; Crystal, Ronald. / Characterization of the coding sequence of the normal M4 ∝1-antitrypsin gene. In: Biochemical and Biophysical Research Communications. 1989 ; Vol. 162, No. 3. pp. 1560-1570.
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