A novel interactive visualization framework for gene expression analysis

Nesreen Mahmoud, Hend El-Eraky, Noha Yousri, Sara Magdy, Omneya Khaled, Mai Ahmed, Shaimaa Abdel-Moety

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

Visualization techniques provide attractive tools to explore and analyze huge and high dimensional gene expression sets. Several visualization techniques have been developed that enabled users to visually analyze high dimensional data. However, these techniques should be integrated with efficient exploration techniques, as efficient clustering, outlier analysis, ensembles and cluster validation to boost the quality of the analysis process. Integrating such techniques in an interactive framework exploits users' knowledge to further enhance the analysis process. In this work, an interactive visualization framework for gene expression analysis is proposed that introduces several features to the visualization process by integrating it with recent data analysis algorithms in an interactive framework.

Original languageEnglish
Title of host publicationProceedings of the 2010 10th International Conference on Intelligent Systems Design and Applications, ISDA'10
Pages1247-1252
Number of pages6
DOIs
Publication statusPublished - 1 Dec 2010
Externally publishedYes
Event2010 10th International Conference on Intelligent Systems Design and Applications, ISDA'10 - Cairo, Egypt
Duration: 29 Nov 20101 Dec 2010

Other

Other2010 10th International Conference on Intelligent Systems Design and Applications, ISDA'10
CountryEgypt
CityCairo
Period29/11/101/12/10

Fingerprint

Gene expression
Visualization

Keywords

  • Clustering
  • Data analysis
  • Gene expression
  • High dimensions
  • Interactivity
  • Visualization

ASJC Scopus subject areas

  • Artificial Intelligence
  • Computer Science Applications
  • Hardware and Architecture

Cite this

Mahmoud, N., El-Eraky, H., Yousri, N., Magdy, S., Khaled, O., Ahmed, M., & Abdel-Moety, S. (2010). A novel interactive visualization framework for gene expression analysis. In Proceedings of the 2010 10th International Conference on Intelligent Systems Design and Applications, ISDA'10 (pp. 1247-1252). [5687079] https://doi.org/10.1109/ISDA.2010.5687079

A novel interactive visualization framework for gene expression analysis. / Mahmoud, Nesreen; El-Eraky, Hend; Yousri, Noha; Magdy, Sara; Khaled, Omneya; Ahmed, Mai; Abdel-Moety, Shaimaa.

Proceedings of the 2010 10th International Conference on Intelligent Systems Design and Applications, ISDA'10. 2010. p. 1247-1252 5687079.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Mahmoud, N, El-Eraky, H, Yousri, N, Magdy, S, Khaled, O, Ahmed, M & Abdel-Moety, S 2010, A novel interactive visualization framework for gene expression analysis. in Proceedings of the 2010 10th International Conference on Intelligent Systems Design and Applications, ISDA'10., 5687079, pp. 1247-1252, 2010 10th International Conference on Intelligent Systems Design and Applications, ISDA'10, Cairo, Egypt, 29/11/10. https://doi.org/10.1109/ISDA.2010.5687079
Mahmoud N, El-Eraky H, Yousri N, Magdy S, Khaled O, Ahmed M et al. A novel interactive visualization framework for gene expression analysis. In Proceedings of the 2010 10th International Conference on Intelligent Systems Design and Applications, ISDA'10. 2010. p. 1247-1252. 5687079 https://doi.org/10.1109/ISDA.2010.5687079
Mahmoud, Nesreen ; El-Eraky, Hend ; Yousri, Noha ; Magdy, Sara ; Khaled, Omneya ; Ahmed, Mai ; Abdel-Moety, Shaimaa. / A novel interactive visualization framework for gene expression analysis. Proceedings of the 2010 10th International Conference on Intelligent Systems Design and Applications, ISDA'10. 2010. pp. 1247-1252
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