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Research Output 2007 2019

  • 314 Citations
  • 8 h-Index
  • 13 Article
  • 3 Conference contribution
  • 1 Comment/debate
  • 1 Letter
Article
6 Citations (Scopus)
Data transfer
Data storage equipment
Program processors
Tuning
Sorting
39 Citations (Scopus)

Adipose gene expression prior to weight loss can differentiate and weakly predict dietary responders

Mutch, D. M., Temanni, R., Henegar, C., Combes, F., Pelloux, V., Holst, C., Sørensen, T. I. A., Astrup, A., Martinez, J. A., Saris, W. H. M., Viguerie, N., Langin, D., Zucker, J. D. & Clément, K., 19 Dec 2007, In : PLoS One. 2, 12, e1344.

Research output: Contribution to journalArticle

Gene expression
Weight Loss
Fat-Restricted Diet
weight loss
Gene Expression
38 Citations (Scopus)

A distinct adipose tissue gene expression response to caloric restriction predicts 6-mo weight maintenance in obese subjects

Mutch, D. M., Pers, T. H., Temanni, R., Pelloux, V., Marquez-Quinõnes, A., Holst, C., Martinez, J. A., Babalis, D., Van Baak, M. A., Handjieva-Darlenska, T., Walker, C. G., Astrup, A., Saris, W. H. M., Langin, D., Viguerie, N., Zucker, J. D. & Cleḿent, K., 1 Dec 2011, In : American Journal of Clinical Nutrition. 94, 6, p. 1399-1409 11 p.

Research output: Contribution to journalArticle

Caloric Restriction
Adipose Tissue
Maintenance
Gene Expression
Weights and Measures
6 Citations (Scopus)

Diagnosis implications of the whole genome sequencing in a large Lebanese family with hyaline fibromatosis syndrome

Haidar, Z., Temanni, R., Chouery, E., Jitesh, P., Liu, W., Al-Ali, R. J., Wang, E., Marincola, F. M., Jalkh, N., Haddad, S., Haidar, W., Chouchane, L. & Mégarbané, A., 19 Jan 2017, In : BMC Genetics. 18, 1, 3.

Research output: Contribution to journalArticle

Systemic Hyalinosis
Genome
Gingival Hyperplasia
Contracture
Joints
95 Citations (Scopus)

Molecular mechanisms of desiccation tolerance in the resurrection glacial relic Haberlea rhodopensis

Gechev, T. S., Benina, M., Obata, T., Tohge, T., Sujeeth, N., Minkov, I., Hille, J., Temanni, R., Marriott, A. S., Bergström, E., Thomas-Oates, J., Antonio, C., Mueller-Roeber, B., Schippers, J. H. M., Fernie, A. R. & Toneva, V., Feb 2013, In : Cellular and Molecular Life Sciences. 70, 4, p. 689-709 21 p.

Research output: Contribution to journalArticle

Desiccation
Genes
Fluid Therapy
Droughts
Catalase

Monoallelic expression in melanoma

Silcock, L., Almabrazi, H., Mokrab, Y., Jithesh, P. V., Al-Hashmi, M., James, N., Mathew, R., Mattei, V., Bedognetti, D., Lessi, F., Temanni, R., Seliger, B., Al-Ali, R. J., Marincola, F. M., Wang, E. & Tomei, S., 5 Apr 2019, In : Journal of translational medicine. 17, 1, 112.

Research output: Contribution to journalArticle

Open Access
Melanoma
Genes
RNA
Chromosomes
Cells
13 Citations (Scopus)

Next-generation sequencing reveals novel rare fusion events with functional implication in prostate cancer

Teles Alves, I., Hartjes, T., McClellan, E., Hiltemann, S., Böttcher, R., Dits, N., Temanni, R., Janssen, B., Van Workum, W., Van Der Spek, P., Stubbs, A., De Klein, A., Eussen, B., Trapman, J. & Jenster, G., 29 Jan 2015, In : Oncogene. 34, 5, p. 568-577 10 p.

Research output: Contribution to journalArticle

Gene Fusion
Prostatic Neoplasms
Genome
Cell Proliferation
Gene Rearrangement
10 Citations (Scopus)

Obesity susceptibility loci in Qataris, a highly consanguineous Arabian population

Tomei, S., Mamtani, R., Al-Ali, R. J., Elkum, N., Abdulmalik, M., Ismail, A., Cheema, S., Rouh, H. A., Aigha, I. I., Hani, F., Al-Samraye, S., Taher Aseel, M., El Emadi, N., Al Mujalli, A., Abdelkerim, A., Youssif, S., Worschech, A., El Sebakhy, E., Temanni, R., Khanna, V. & 8 others, Wang, E., Kizhakayil, D., Al-Thani, A. A., Al-Thani, M., Lowenfels, A., Marincola, F. M., Sheikh, J. & Chouchane, L., 13 Apr 2015, In : Journal of Translational Medicine. 13, 1, 119.

Research output: Contribution to journalArticle

Blood
Obesity
Alleles
DNA
Population
1 Citation (Scopus)

Osteolytic cancer cells induce vascular/axon guidance processes in the bone/bone marrow stroma

Hensel, J., Wetterwald, A., Temanni, R., Keller, I., Riether, C., Pluijm, G. V. D., Cecchini, M. G. & Thalmann, G. N., 22 Jun 2018, In : Oncotarget. 9, 48, p. 28877-28896 20 p.

Research output: Contribution to journalArticle

Blood Vessels
Bone Marrow
Bone and Bones
Transcriptome
Neoplasms
3 Citations (Scopus)

Semantic assembly and annotation of draft RNAseq transcripts without a reference genome

Ptitsyn, A., Temanni, R., Bouchard, C. & Anderson, P. A. V., 22 Sep 2015, In : PLoS One. 10, 9, e0138006.

Research output: Contribution to journalArticle

Transcriptome
Semantics
transcriptome
Genes
Genome
6 Citations (Scopus)

Temple-Baraitser Syndrome and Zimmermann-Laband Syndrome: One clinical entity?

Mégarbané, A., Al-Ali, R. J., Choucair, N., Lek, M., Wang, E., Ladjimi, M., Rose, C. M., Hobeika, R., Macary, Y., Temanni, R., Jithesh, P. V., Ismail EP Chouchane, A., Konduru, S. S., Thomas, R., Tomei, S., Liu, W., Marincola, F. M., MacArthur, D. & Chouchane, L., 10 Jun 2016, In : BMC Medical Genetics. 17, 1, 42.

Research output: Contribution to journalArticle

Mutation
Genome
Voltage-Gated Potassium Channels
Missense Mutation
Glycine
20 Citations (Scopus)

The molecular signature of the stroma response in prostate cancer-induced osteoblastic bone metastasis highlights expansion of hematopoietic and prostate epithelial stem cell niches

Özdemir, B. C., Hensel, J., Secondini, C., Wetterwald, A., Schwaninger, R., Fleischmann, A., Raffelsberger, W., Poch, O., Delorenzi, M., Temanni, R., Mills, I. G., Van Der Pluijm, G., Thalmann, G. N. & Cecchini, M. G., 8 Dec 2014, In : PLoS One. 9, 12, e114530.

Research output: Contribution to journalArticle

Stem Cell Niche
prostatic neoplasms
Stem cells
metastasis
stem cells
56 Citations (Scopus)

Transcriptome Remodeling in Trypanosoma cruzi and Human Cells during Intracellular Infection

Li, Y., Shah-Simpson, S., Okrah, K., Belew, A. T., Choi, J., Caradonna, K. L., Padmanabhan, P., Ndegwa, D. M., Temanni, R., Corrada Bravo, H., El-Sayed, N. M. & Burleigh, B. A., 1 Apr 2016, In : PLoS Pathogens. 12, 4, e1005511.

Research output: Contribution to journalArticle

Trypanosoma cruzi
Transcriptome
Infection
Parasites
Energy Metabolism
Comment/debate

Erratum: Diagnosis implications of the whole genome sequencing in a large Lebanese family with hyaline fibromatosis syndrome [BMC Genet. 18, (2017), (3)], DOI: 10.1186/s12863-017-0471-0

Haidar, Z., Temanni, R., Chouery, E., Jithesh, P. V., Liu, W., Al-Ali, R. J., Wang, E., Marincola, F. M., Jalkh, N., Haddad, S., Haidar, W., Chouchane, L. & Mégarbané, A., 1 Feb 2017, In : BMC Genetics. 18, 1, 9.

Research output: Contribution to journalComment/debate

Systemic Hyalinosis
Viverridae
Names
Publications
Genome
Conference contribution
1 Citation (Scopus)

Modulation of mRNA circadian transcription cycle by microRNAs

Ptitsyn, A., Ptitsyna, N., Elsebakhi, E., Marincola, F., Al-Ali, R. J., Temanni, R., Al Saad, R. T. & Wang, E., 2014, 2014 Middle East Conference on Biomedical Engineering, MECBME 2014. IEEE Computer Society, p. 180-183 4 p. 6783235

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transcription
Modulation
Digital filters
Gene expression
Modulators
2 Citations (Scopus)

Optimization of data-intensive next generation sequencing in high performance computing

Kathiresan, N., Al-Ali, R. J., Jithesh, P. V., AbuZaid, T., Temanni, R. & Ptitsyn, A., 28 Dec 2015, 2015 IEEE 15th International Conference on Bioinformatics and Bioengineering, BIBE 2015. Institute of Electrical and Electronics Engineers Inc., 7367654

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computing Methodologies
Workflow
Genes
Program processors
Genome
7 Citations (Scopus)

Performance improvement of BWA MEM algorithm using data-parallel with concurrent parallelization

Kathiresan, N., Temanni, R. & Al-Ali, R. J., 3 Feb 2015, Proceedings of 2014 3rd International Conference on Parallel, Distributed and Grid Computing, PDGC 2014. Institute of Electrical and Electronics Engineers Inc., p. 406-411 6 p. 7030780

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Genes
Data storage equipment
Cache memory
Data compression
Processing
Letter
11 Citations (Scopus)

Illumina sequencing technology as a method of identifying t-Dna insertion loci in activation- tagged arabidopsis thaliana plants

Polkoa, J. K., Temanni, R., Van Zantena, M., Van Workumb, W., Iburga, S., Pierika, R., Voeseneka, L. A. C. J. & Peetersa, A. J. M., Jul 2012, In : Molecular Plant. 5, 4, p. 948-950 3 p.

Research output: Contribution to journalLetter

Arabidopsis
Arabidopsis thaliana
Technology
loci
methodology